Murphy M, Dyer R, Cushman SA. 2016. Chapter 10: Graph Theory and Network Models in Landscape Genetics. Landscape Genetics: Concepts, Methods, Applications, First Edition. Edited by Niko Balkenhol, Samuel A. Cushman, Andrew T. Storfer, and Lisette P. Waits. PDF

Foster EL, Chan DM, Dyer RJ. Model Comparison for Abiotic versus Biotic Pollen Dispersal. Nonlinear Dynamics Psychol Life Sci. 2016 Oct;20(4):471-83. PMID: 27550704. Abstract An agent-based model with a correlated random walk is used to explore pollination within a forest. For abiotic dispersal, say via

Anna M. Tucker, Rodney J. Dyer, Sarah K. Huber, Lesley P. Bulluck, Opportunistic conspecific brood parasitism in a box-nesting population of Prothonotary Warblers (Protonotaria citrea), The Auk, Volume 133, Issue 2, 1 April 2016, Pages 298–307, https://doi.org/10.1642/AUK-15-161.1 Abstract Conspecific brood

Dyer, RJ. 2016. Chapter 11: Landscapes and Plant Population Genetics. Landscape Genetics: Concepts, Methods, Applications, First Edition. Edited by Niko Balkenhol, Samuel A. Cushman, Andrew T. Storfer, and Lisette P. Waits. PDF

Dyer RJ. 2015. Population graphs and landscape genetics. Annual Review of Ecology, Evolution, and Systematics. 46: 327-342. https://doi.org/10.1146/annurev-ecolsys-112414-054150 Abstract At the heart of the analyses of landscape genetics are isolation models seeking to explain either interindividual or interpopulation connectivity. These models

Lu Yang, Zhan-Lin Liu, Jianfang Li, Rodney J. Dyer. 2015. Genetic structure of Pinus henryi and Pinus tabuliformis: Natural landscapes as significant barriers to gene flow among populations. Biochemical Systematics and Ecology, 61: 124-132. https://doi.org/10.1016/j.bse.2015.06.003 Abstract Mountains as natural

Dyer, R. J. (2015). Is there such a thing as landscape genetics? Molecular Ecology, 24(14), 3518-3528. https://doi.org/10.1111/mec.13249. GitHub. Abstract For a scientific discipline to be interdisciplinary, it must satisfy two conditions: it must consist of contributions from at least two existing disciplines,

Garrick RC, Collins BD, Yi RN, Dyer RJ, Hyseni C. 2015. Identification of Eastern United States Reticulitermes Termite Species via PCR-RFLP, Assessed Using Training and Test Data. Insects 6: 524-537; doi:10.3390/insects6020524 Abstract Reticulitermes termites play key roles in dead wood decomposition and nutrient cycling in

DiLeo, M.F., Siu, J.C., Rhodes, M.K., López-Villalobos, A., Redwine, A., Ksiazek, K. and Dyer, R.J. (2014), The gravity of pollination: integrating at-site features into spatial analysis of contemporary pollen movement. Mol Ecol, 23: 3973-3982. https://doi.org/10.1111/mec.12839 Abstract Pollen-

Garrick, R. C., Nason, J. D., Fernández-Manjarrés, J. F., & Dyer, R. J. (2013). Ecological co-associations influence species' responses to past climatic change: An example from a Sonoran Desert bark beetle. Molecular Ecology, 22(12), 3345-3361. https://doi.org/10.1111/mec.12318 Abstract Ecologically interacting

Sork, V.L., Aitken, S.N., Dyer, R.J. et al. Putting the landscape into the genomics of trees: approaches for understanding local adaptation and population responses to changing climate. Tree Genetics & Genomes 9, 901–911 (2013). https://doi.org/10.1007/s11295-013-0596-x Abstract The Forest

ECKERT, A. J., & DYER, R. J. (2012). Defining the landscape of adaptive genetic diversity. Molecular Ecology, 21(12), 2836-2838. https://doi.org/10.1111/j.1365-294X.2012.05615.x Abstract Whether they describe fitness, genome architecture or the spatial distribution of environmental variables, the concept of a

Klütsch, C.F.C., Dyer, R.J. & Misof, B. Combining multiple analytical approaches for the identification of population structure and genetic delineation of two subspecies of the endemic Arabian burnet moth Reissita simonyi (Zygaenidae; Lepidoptera).Conserv Genet 13, 21–37 (2012). https://doi.org/10.1007/s10592-011-0259-

Dyer, R.J., Chan, D.M., Gardiakos, V.A. et al. Pollination graphs: quantifying pollen pool covariance networks and the influence of intervening landscape on genetic connectivity in the North American understory tree, Cornus florida L.. Landscape Ecol 27, 239–251 (2012). https://doi.org/10.1007/s10980-011-9696-

Baker, S.A., Dyer, R.J. Invasion genetics of Microstegium vimineum (Poaceae) within the James River Basin of Virginia, USA. Conserv Genet 12, 793–803 (2011). https://doi.org/10.1007/s10592-011-0186-0 Abstract Patterns of spatial genetic structure produced following the expansion of an invasive species into

DYER, R. J., NASON, J. D., & GARRICK, R. C. (2010). Landscape modeling of gene flow: Improved power using conditional genetic distance derived from the topology of population networks. Molecular Ecology, 19(17), 3746-3759. https://doi.org/10.1111/j.1365-294X.2010.04748.x Abstract Landscape genetics is

Garrick, R.C., Sunnucks, P. & Dyer, R.J. Nuclear gene phylogeography using PHASE: dealing with unresolved genotypes, lost alleles, and systematic bias in parameter estimation. BMC Evol Biol 10, 118 (2010). https://doi.org/10.1186/1471-2148-10-118 Abstract A widely used approach for screening nuclear DNA

GARRICK, R. C., NASON, J. D., MEADOWS, C. A., & DYER, R. J. (2009). Not just vicariance: Phylogeography of a Sonoran Desert euphorb indicates a major role of range expansion along the Baja peninsula. Molecular Ecology, 18(9), 1916-1931. https://doi.org/10.1111/j.1365-294X.2009.04148.

Abstract The analysis of genetic marker data is increasingly being conducted in the context of the spatial arrangement of strata (e.g. populations) necessitating a more flexible set of analysis tools. GeneticStudio consists of four interacting programs: (i) Geno a spreadsheet-like interface for the analysis of spatially explicit marker-

Garrick, R.C., Meadows, C.A., Nason, J.D. et al. Variable nuclear markers for a Sonoran Desert bark beetle, Araptus attenuatus Wood (Curculionidae: Scolytinae), with applications to related genera. Conserv Genet 10, 1177–1179 (2009). https://doi.org/10.1007/s10592-008-9738-3 Abstract We report eight new

GARRICK, R. C., DYER, R. J., BEHEREGARAY, L. B., & SUNNUCKS, P. (2008). Babies and bathwater: A comment on the premature obituary for nested clade phylogeographical analysis. Molecular Ecology, 17(6), 1401-1403. https://doi.org/10.1111/j.1365-294X.2008.03675.x

Abstract We developed seven nuclear intron markers for Euphorbia lomelii. New exon-primed intron-crossing (EPIC) oligonucleotides were used for initial amplification and sequencing, then locus-specific primers and restriction-fragment-length polymorphism genotyping assays were designed. Loci showed no significant deviation from Hardy-Weinberg and linkage equilibrium, and they